Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

Robert M Bowers, Nikos C Kyrpides, Ramunas Stepanauskas et al. · 2017

Read Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea by Robert M Bowers, Nikos C Kyrpides, Ramunas Stepanauskas et al. (2017) in the Tower of Babel, a free online library of public-domain works preserved in clean, searchable text. No sign-up. The full text is served as a plain-text file at a predictable URL, where text is present: https://antarctic-labs.com/tower-of-babel/pmc-6436528.txt.

Description

Robert Bowers, Nikos Kyrpides, Ramunas Stepanauskas, and a large group proposed genome reporting standards in 2017. Most microbes cannot be grown in culture. Their genomes come from single cells or from mixed community samples instead.

The MISAG and MIMAG standards set what must be reported with such genomes. They grade genomes by completeness and contamination and ask for basic facts like size and gene counts. Shared grades let databases and readers judge quality at a glance. The standards brought order to a flood of uncultivated genomes entering public archives. Journals and databases were urged to ask authors for these data with every genome submission.

Catalog record

CREATORRobert M Bowers, Nikos C Kyrpides, Ramunas Stepanauskas et al.
YEAR2017
COLLECTIONPAPERS
FORMATTXT
FILE SIZE39 KB
LICENSECreative Commons Attribution License
RIGHTSCC BY
SOURCEPubMed Central

Source: https://pmc.ncbi.nlm.nih.gov/articles/PMC6436528/

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