PixelDeck: A local-first media library manager for biomedical imaging

Benjamin L. Kidder · 2026

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Description

Organizing huge biomedical image collections on a local workstation is the purpose of PixelDeck, presented by Benjamin L. Kidder in a 2026 software paper. Labs in histology and fluorescence microscopy generate overwhelming piles of images and videos that plain file systems handle poorly.

PixelDeck is an open-source browser application that imports files recursively, flags duplicates by SHA-256 hashing, extracts metadata, builds thumbnails, and offers full-text search over a SQLite-backed store. Benchmarks on libraries up to 1000 assets showed import speeds above 500 files per minute and typical search answers in milliseconds. Keeping everything local-first suits sensitive research data and ordinary hardware.

Catalog record

CREATORBenjamin L. Kidder
YEAR2026
COLLECTIONPAPERS
FORMATTXT
FILE SIZE24821
LICENSEhttps://creativecommons.org/licenses/by/4.0
RIGHTSCC BY
SOURCEEurope PMC

Source: https://europepmc.org/article/MED/PMC13341158

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