Terminal residues modulate DNA-binding site size and stability of the SSB-like DNA-binding protein Gp13 from bacteriophage Phi11

Vivek Ratre, Malabika Biswas · 2026

Read Terminal residues modulate DNA-binding site size and stability of the SSB-like DNA-binding protein Gp13 from bacteriophage Phi11 by Vivek Ratre, Malabika Biswas (2026) in the Tower of Babel, a free online library of public-domain works preserved in clean, searchable text. No sign-up. The full text is served as a plain-text file at a predictable URL, where text is present: https://antarctic-labs.com/tower-of-babel/pmc-13333961.txt.

Description

Vivek Ratre and Malabika Biswas examine a DNA-binding protein in a 2026 laboratory study. The protein is Gp13 from bacteriophage Phi11, and it binds single-stranded DNA. It has an oligonucleotide and oligosaccharide-binding fold near one end and works as a pair.

The team made versions of Gp13 with small parts cut from either end. Cutting a few end residues weakened DNA binding and shrank the binding site size. Larger cuts at the front end stopped binding, which flags a key stretch of residues. Most altered proteins stayed paired, so the pairing region lies elsewhere. The work shows how the ends tune both grip and stability.

Catalog record

CREATORVivek Ratre, Malabika Biswas
YEAR2026
COLLECTIONPAPERS
FORMATTXT
FILE SIZE41 KB
VERSION1.0
LICENSECC BY 4.0
RIGHTSCC BY
SOURCEEurope PMC

Source: https://europepmc.org/articles/PMC13333961

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