MDNA : a software module for DNA structure generation and analysis

Thor van Heesch, Enrico Skoruppa, Peter G Bolhuis, Helmut Schiessel, Jocelyne Vreede · 2026

Read MDNA : a software module for DNA structure generation and analysis by Thor van Heesch, Enrico Skoruppa, Peter G Bolhuis, Helmut Schiessel, Jocelyne Vreede (2026) in the Tower of Babel, a free online library of public-domain works preserved in clean, searchable text. No sign-up. The full text is served as a plain-text file at a predictable URL, where text is present: https://antarctic-labs.com/tower-of-babel/pmc-13227108.txt.

Description

Thor van Heesch and co-authors introduced a software toolkit called MDNA in two thousand twenty-six. The toolkit helps scientists build and study complex shapes made of DNA. Models like these are starting points for computer tests of how molecules move and act. Older tools handled straight DNA well but struggled with bent or joined structures.

MDNA builds DNA shapes by mapping them onto smooth curves. It can add common chemical changes found in living cells. It can also add shifts in how the base pairs link up. A search method then refines each shape to use less energy. Built-in tools measure the shape and track how it changes over time.

Catalog record

CREATORThor van Heesch, Enrico Skoruppa, Peter G Bolhuis, Helmut Schiessel, Jocelyne Vreede
YEAR2026
COLLECTIONPAPERS
FORMATTXT
FILE SIZE40 KB
VERSION1.0
LICENSECC BY 4.0
RIGHTSCC BY
SOURCEEurope PMC

Source: https://europepmc.org/articles/PMC13227108

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