DNA Hybridization Kinetics Observed at the Single-Molecule Level Using Graphene Near-Field Effects

Maria · 2024

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Description

Soares, Freitas, Queirós, Purwidyantri, Alpuim, and Nieder watch single DNA molecules pair up in real time. Their sensor is a sheet of graphene carrying fluorophore-labeled DNA hairpins. Graphene quenches the labels in a distance-dependent way, so hybridization changes the light signal as hairpins move. A wide-field fluorescence microscope with a sensitive camera captured signals from single hairpins at low target concentration.

The team used the signals for super-resolution localization of each hairpin and measured how fast single hairpins unfold, at about 7 seconds. Some molecules paused in partly hybridized states, which more than doubled the unfolding time. A semiempirical model helped explain the observed kinetics.

Catalog record

CREATORMaria
YEAR2024
COLLECTIONPAPERS
FORMATTXT
FILE SIZE36 KB
VERSION1.0
LICENSECC BY 4.0
RIGHTSCC BY
SOURCEEurope PMC

Source: https://europepmc.org/articles/PMC11647878

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