Chromosome-scale genome assembly of acerola (Malpighia emarginata DC.)

Kenta Shirasawa, Kazuhiko Harada, Noriaki Haramoto, Hitoshi Aoki, Shota Kammera, Masashi Yamamoto, Yu Nishizawa · 2024

Read Chromosome-scale genome assembly of acerola (Malpighia emarginata DC.) by Kenta Shirasawa, Kazuhiko Harada, Noriaki Haramoto, Hitoshi Aoki, Shota Kammera, Masashi Yamamoto, Yu Nishizawa (2024) in the Tower of Babel, a free online library of public-domain works preserved in clean, searchable text. No sign-up. The full text is served as a plain-text file at a predictable URL, where text is present: https://antarctic-labs.com/tower-of-babel/pmc-11555059.txt.

Description

Kenta Shirasawa and six co-authors build, in 2024 work, the first full gene map of acerola, a tropical shrub famed for fruit rich in vitamin C. Breeders want to raise that food value, and gene tools can speed the work even in long-lived fruit plants. Till now, such tools for acerola were scarce.

Long, clean gene reads plus a cross map gave ten large stretches that span the shrub's full set of genes, with tens of thousands of genes placed. A family tree built from gene marks across sixty breeding lines fell into three clear groups. The team offers the map, the gene list, and the family tree as a base for faster breeding and for work on kin plants.

Catalog record

CREATORKenta Shirasawa, Kazuhiko Harada, Noriaki Haramoto, Hitoshi Aoki, Shota Kammera, Masashi Yamamoto, Yu Nishizawa
YEAR2024
COLLECTIONPAPERS
FORMATTXT
FILE SIZE22 KB
VERSION1.0
LICENSECC BY 4.0
RIGHTSCC BY
SOURCEEurope PMC

Source: https://europepmc.org/articles/PMC11555059

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