COMMO: a web server for the identification and analysis of consensus gene modules across multiple methods
Xiaojing Wu, Mingfei Han, Xinyu Song, Song He, Xiaochen Bo, Yunping Zhu, Pier Luigi Martelli · 2023
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Description
Xiaojing Wu and co-authors introduce COMMO, a free web server that finds groups of genes that work together. The tool was described in 2023. Many methods exist for spotting such gene modules in expression data, but they often disagree. COMMO runs eight leading methods and then merges their answers with two consensus methods, so the shared modules stand out.
The server comes loaded with gene and protein data for 33 cancer types from three public databases. Users can also upload their own data. After modules are found, users can test what the genes do and whether they link to patient survival. Results appear as interactive charts that can be adjusted and saved. The authors aim the tool at researchers in precision medicine who lack coding support.
Catalog record
| CREATOR | Xiaojing Wu, Mingfei Han, Xinyu Song, Song He, Xiaochen Bo, Yunping Zhu, Pier Luigi Martelli |
|---|---|
| YEAR | 2023 |
| COLLECTION | PAPERS |
| FORMAT | TXT |
| FILE SIZE | 10 KB |
| VERSION | 1.0 |
| LICENSE | CC BY 4.0 |
| RIGHTS | CC BY |
| SOURCE | Europe PMC |